Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSN---NSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPE-INVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 2BDW Chain:A ((17-270)) | -------------------------------------------------------------------------------------------------------------EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--R------------------------------------DFQKLEREARICRKLQ----HPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES-IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----------------WHGFAGTPGYLSPEV---------LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA---QI--KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIATRNLSN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76122 for 1836 contacts (-41.5/contact) +
2D Compatibility (PS) -25772 + (NN) -9811 + (LL) 15652
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -105953.0 ( -57.71 by residue)
QMean score : 0.331
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