Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHISKDVEKFN-NSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
3GZL Chain:A ((4-79))
------KSTFDDI----KKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYI--EKNNK
General information:
TITO was launched using:
RESULT:
Template:
3GZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9869 for 485 contacts (-20.3/contact) +
2D Compatibility (PS) -8380 + (NN) -3544 + (LL) 932
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -28261.0 ( -58.27 by residue)
QMean score : 0.724
(partial model without unconserved sides chains):
PDB file :
Tito_3GZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZL-query.scw
PDB file :
Tito_Scwrl_3GZL.pdb
: