Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESNYNADAIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDESLAGYCDKIEVSINEDGSVSVTDNGRGIPTDIHKEEGISAAEVIMTQLHAGGKFDSNTYKVSGGLHGVGISVVNALSSWLELTIWRNKKEHFMRFED-GESIEPLKIVNKN-TNKRGTRVTFMPSTETFSSIDFSYSTLENRIRELAFLNSSINITLRDLRNKPYIESHFNDSKQSKDNFGTANFVRYLDKNKTHVTKITSMKGDAKDLGISIEISMEWNDSYYEHMLCFTNNIRQRDGGTHLAGFRSALTRCINNYATDEGFLKKAKVSLTGEDVREGLTCVLSLKMPDPKFSSQTKDKLVSSEARTVVESIVFDKLSTILETDPKLAASIVERVIRSAKGREAARKARELVKNKNSIDISTLPGKLADCQEKVPELSELFIVEGNSAGGTAKQGRNRKTQAVLALRGKILNVERVSLDRIFSSAEIGSLITAIGAGIGSEHFDIEKTRYHKIIIMTDADVDGSHIRTLILTFFFRYMREVIERGYLYIAQPPLYKVTKNAEDTYIKDDETFEKYIVNLAVKKLTLNSTGRGLRFILSKCLSISNISKNYSRGIPQNLLESLLILSKKNALSSANEILKYLKLMYSEYNWEVEIKDEEREVHISKLFQGLADKYVFPLSMLDSKEIRNILSSLDDVIDLFNGDSFLKSQETEIKIRSPSALAKIVMDYGKKGLTLQRFKGLGEMNADQLWDTTLNPETRTLLKVEIKDCEEADSIFSVLMGDIVEPRRNFINNNALNVYDVDI |
4MB9 Chain:A ((17-226)) | ----------QVLEGLDAVRKRPGMYIGSTD-GAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHA-MGIPTVEVIFTILHAG------------GLHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTALKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESAFLLKNVTLSLTDKRTDEAIEFHYEN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96829 for 1592 contacts (-60.8/contact) +
2D Compatibility (PS) -21398 + (NN) -8515 + (LL) 40224
1D Compatibility (HY) -18400 + (ID) 5400
Total energy: -110318.0 ( -69.30 by residue)
QMean score : 0.501
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