Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRD------------LTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYV-------SDEGKDEFNY-----KNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSI-PMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
| 4EFZ Chain:A ((1-298)) | GPGSMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTAR-----CDFPGGD---ARSLYRSIRKVLSLPPATRLYMCHDYQPA-----IQYASTVADELRENVHIREGVTEDDFVAMRTARDATLD-----MPVLMLPSVQVNMRAGRLPEPEDNGVRY----------------LKIPLDAI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84946 for 2203 contacts (-38.6/contact) +
2D Compatibility (PS) -29093 + (NN) -13210 + (LL) 2604
1D Compatibility (HY) -8400 + (ID) 2800
Total energy: -135845.0 ( -61.66 by residue)
QMean score : 0.412
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