Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTLMSTQSQDVSYGTYYTIDSNGDYHHTPDG-----NWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATA---GDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHDGNGKVNYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQSR------------------------------------------------- |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRD--ANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGH----YYDSKAQEVAGFLLETPVKYTRISSPF--------SYGRFHR--PHYGVDYAAKHGSLIHSASDGRVGFMGVKA-GYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTG----PHLHFGVYKNS----RPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29395 for 2200 contacts (13.4/contact) +
2D Compatibility (PS) -30406 + (NN) -8861 + (LL) 864
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -21158.0 ( -9.62 by residue)
QMean score : 0.242
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