Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQ-GKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
4RHU Chain:E ((21-200))
---DIKSVLLTAEQIQARIAELGEQIGNDYRTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSS------------ILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118891 for 1240 contacts (-95.9/contact) +
2D Compatibility (PS) -17460 + (NN) -2087 + (LL) 280
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -163408.0 ( -131.78 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_4RHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHU-query.scw
PDB file :
Tito_Scwrl_4RHU.pdb
: