Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRK-ERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK
3HSZ Chain:A ((3-142))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGAMLWPLFEIAPELVFPDGEM----------------
General information:
TITO was launched using:
RESULT:
Template:
3HSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103620 for 1013 contacts (-102.3/contact) +
2D Compatibility (PS) -14403 + (NN) -4772 + (LL) 1800
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -134595.0 ( -132.87 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3HSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSZ-query.scw
PDB file :
Tito_Scwrl_3HSZ.pdb
: