Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTD--YMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPE-GEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFV--ENGKVITPELNGSILPGITRKSIIELAKN-LGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRY-EDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
3UYY Chain:A ((27-358)) | -------------------STLGFSYIRTDLRYLAHWK---DGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKG-GLTPTN-FITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDEL------GKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128946 for 2657 contacts (-48.5/contact) +
2D Compatibility (PS) -35012 + (NN) -7515 + (LL) 2556
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -203017.0 ( -76.41 by residue)
QMean score : 0.462
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