Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLNLGSKKQASFYVACELYKEM-----AFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKN-EDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD
1FS5 Chain:A ((1-252))
MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHV-DIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTL-----
General information:
TITO was launched using:
RESULT:
Template:
1FS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136706 for 2097 contacts (-65.2/contact) +
2D Compatibility (PS) -26717 + (NN) -14924 + (LL) 212
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -199635.0 ( -95.20 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1FS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FS5-query.scw
PDB file :
Tito_Scwrl_1FS5.pdb
: