Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGESGSGKSVTTKAITKLFQGDTGRIKKGEILFLGEDLAKKPENELIKLRGKDISMIFQDP-----MTSLNPTM--QI--GKQVMEPLIKHKNYSKAQAK-KRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLGVVANIADRVAVMYGGQMVETG----DVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPGAPPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPELVKQRMKPMPNNYEKPLKVERVSFNEK |
| 1G6H Chain:A ((18-249)) | -------------------GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGR-----VYFENKDITNKEPAELYHY---GIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDR-KA--GELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLI-IEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPK--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97507 for 1641 contacts (-59.4/contact) +
2D Compatibility (PS) -24032 + (NN) -13743 + (LL) 7964
1D Compatibility (HY) -19600 + (ID) 3800
Total energy: -150718.0 ( -91.85 by residue)
QMean score : 0.454
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