Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIVVALGGNALGKSPQ-----EQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLN-YAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQI----------QKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDY--VYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK |
| 1E19 Chain:A ((2-314)) | GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQ-ATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRV----------VPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVI-LEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEK--EQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGG-ERAIIAHLEKAVEALEGKTGTQVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154405 for 2470 contacts (-62.5/contact) +
2D Compatibility (PS) -32416 + (NN) -14610 + (LL) 744
1D Compatibility (HY) -22400 + (ID) 6600
Total energy: -229687.0 ( -92.99 by residue)
QMean score : 0.599
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