Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVK-----IKVL---QRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLT----FAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 4GP2 Chain:B ((33-249)) | -----------------------------FREAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYF--VQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSD----DRGLAEAAWNFGMAAGVAFQIIDDVLDIYGD------EIGKDIKEHK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16963 for 1425 contacts (-11.9/contact) +
2D Compatibility (PS) -21982 + (NN) -14577 + (LL) 6572
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -62700.0 ( -44.00 by residue)
QMean score : 0.271
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