Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANF----NSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQISLADA--EKYLAEFDIVINTTPAGMAGNNESIIN---LK-HLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 3PHJ Chain:A ((6-246)) | --FGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES-HIKSEFLHLG-LSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-----YQNA--LILGAGGSAKALACELKK-QGLQVSVLNRS-----SRGLDFFQRLGCDCFMEPPKSAFDLIINATS-------ELPLNKEVLKGYFKEGKLAYDLAY-GFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104121 for 1904 contacts (-54.7/contact) +
2D Compatibility (PS) -23252 + (NN) -465 + (LL) 3180
1D Compatibility (HY) -19600 + (ID) 4350
Total energy: -148608.0 ( -78.05 by residue)
QMean score : 0.361
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