Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFKEAQAFIENMYKECHYETQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNVIDARDVTDEASFLSSITYHITQATNEGKLKPYITIYAPKD-GPK---IFNNQLIRYAGYDN----CGDPAEKEVTRLANHLGWKGKGTNFDVLPLIYQLP-NESVKFYEYPTSLIKEVPIEHNHYPKLRKLNLKWYAVPIISNMDLKIGGIVYPTAPFNGWYMVTEIGVRNFIDDYRYNLLEKVADAFEFDTLKNNSFNKDRALVELNYAVYHSFKKEGVSIVDHLTAAKQFELFERNEAQQGRQVTGKWSWLAPPLSPTLTSNYHHGYDNTVKDPNFFYKKKESNANQCPFHH
4D3K Chain:B ((6-360))ILWNEAKAFIAACYQELGKAAEV-KDRLADIKSEIDLTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDRRDVRTKEEVRDALFHHIETATNNGKIRPTITIFPPEEKGEKQVEIWNHQLIRYAGYESDGERIGDPASCSLTAACEELGWRGERTDFDLLPLIFRMKGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYMGTEIGARNLADEKRYDKLKKVASVIGIAADYNTDLWKDQALVELNKAVLHSYKKQGVSIVDHHTAASQFKRFEEQAEEAGRKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDK-----------


General information:
TITO was launched using:
RESULT:

Template: 4D3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161166 for 2779 contacts (-58.0/contact) +
2D Compatibility (PS) -38312 + (NN) -20451 + (LL) 520
1D Compatibility (HY) -33600 + (ID) 9350
Total energy: -262359.0 ( -94.41 by residue)
QMean score : 0.666

(partial model without unconserved sides chains):
PDB file : Tito_4D3K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D3K-query.scw
PDB file : Tito_Scwrl_4D3K.pdb: