Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKECQELVEKTGIDALAPALGSVHGPYKG--EPKLGFKEMEEIGLSTGLPLVLHGGT---------------------GIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK |
| 1RVG Chain:A ((1-305)) | -MLVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGG--RALTLMAVEL--AKEARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEE----KDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79226 for 2499 contacts (-31.7/contact) +
2D Compatibility (PS) -30561 + (NN) -12131 + (LL) 936
1D Compatibility (HY) -19200 + (ID) 6800
Total energy: -146982.0 ( -58.82 by residue)
QMean score : 0.603
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