Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKVGIDAGGTLIKIV-------------QEQDNQRTFKTEL-----------------------------TKNIDQVVEWLNQQQIEK----LCLTGGNAGVIAENINIPAQIFV--EFDAASQGLGILLKEQG-------------------------HDLADYIFANVGTGTSLHYFDGQ-SQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKD--TEPPIPGDLTAANFGHVLHHLDAD-FTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVL---RGCKPYYVENGAFSGAIGALYLGK- |
| 3MK6 Chain:A ((14-376)) | LVPRGSPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150946 for 2084 contacts (-72.4/contact) +
2D Compatibility (PS) -28785 + (NN) -11358 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 3250
Total energy: -208739.0 ( -100.16 by residue)
QMean score : 0.441
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