Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYA----DI-KVERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
3HHE Chain:A ((23-250))
--NVQQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVAN-GLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLG-AFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVL-
General information:
TITO was launched using:
RESULT:
Template:
3HHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144066 for 1907 contacts (-75.5/contact) +
2D Compatibility (PS) -24210 + (NN) -9777 + (LL) 540
1D Compatibility (HY) -17200 + (ID) 4000
Total energy: -198713.0 ( -104.20 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3HHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHE-query.scw
PDB file :
Tito_Scwrl_3HHE.pdb
: