Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYENCYLGRCCINNHKIILPSDP---DLRVQAEPEIALECDVKYDEKHLVTKLVPNF--FMAFNDASVRNLEATKLSQKKNFSPAS---------KGIGQKLPIDRFVYGGVCNNFSIASFLKYDN-------VWHIYGE-----NSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE |
| 1GTT Chain:A ((220-429)) | HPHGTLFALGLNYADH---------------------PEEPLVFLKAPNTLTG----DNQTSVRPN--NIEYMHYEAELVVVIGKQAR---NVSEADAMDYVAGYTVCNDYAIRDYLE---NYYRPNLRVKSRDGLTPMLSTIVPKEAIP---------------------DPHNLTLRTFVN--GELRQQGTTADLIFSVPFLIAYLSEF-MTLNPGDMIATGTPK-----------------------GLSDVVPGDEVVVEVE-----GVGRLVNRIVSEETAK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36497 for 1281 contacts (-28.5/contact) +
2D Compatibility (PS) -18555 + (NN) 1943 + (LL) 6312
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -49747.0 ( -38.83 by residue)
QMean score : 0.202
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