Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSQLGGLSGLLDGVKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEENRKNLAFNMLGNFAKL
2OD0 Chain:A ((80-103))
------------------------------------------------------AISSELWESSDRLIEVAKKSLENAKL--------------------
General information:
TITO was launched using:
RESULT:
Template:
2OD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4423 for 103 contacts (-42.9/contact) +
2D Compatibility (PS) -2913 + (NN) -3446 + (LL) 3592
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -8590.0 ( -83.40 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2OD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OD0-query.scw
PDB file :
Tito_Scwrl_2OD0.pdb
: