Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKYHSDQEYEEIITDQLGDMQ-LRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAI-----HKNRKQIGKIFEEKLNAA--YEEEPEKLNAIARKHMRKEFESFKMGISGV--NFAIANEGAIWLVENEGNGRMSTTACDVHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLRSDKVGEGRGVVKGAKSTQHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE-- |
| 4KNC Chain:A ((15-437)) | GNLCPAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTYDLRTDFGTSAEGWRELRALRDELKRKGI----ELVVVYQPT---RGLVNREKLSPAEKAGFDYELAKKNYLATIARFRQ--------------AGIWT--PDFSPLF----DEKEEHAYYFKGDHHWTPHGARRSAKIVAETLKQVPGFEEIPKKQFESKRVGLLSKLGTFHKAAAQLCGNSYATQYVDRFETEPVGNPQIALVGTSNSGPAYNFAGFLEEFSGADILNN--AVSGGGFDSSLLAYMTS---EEFHKNPPK---ILIWEFATHYDMAQKSFYRQAMPLVDNGCSGRKTVLSRKVK-----LRQGRNEVLLNSAALPIRSGSYVADVTYS----------DPSVHELKNTIWY-----------------MNGRREQLKIEQSKAVDTGGRYVFQLRNDSDWAD-----QQFLSLEIEA------PDMPQGL-----EVQASICQAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10198 for 3273 contacts (-3.1/contact) +
2D Compatibility (PS) -40797 + (NN) -2614 + (LL) 5936
1D Compatibility (HY) -8800 + (ID) 3700
Total energy: -60173.0 ( -18.38 by residue)
QMean score : ?
|
|
|