Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKT-HKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-NKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
1HYQ Chain:A ((2-233)) | --------------------------VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKANP-EKLEDVLTQIM--ESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLGIE-MA----KNEIEAI---LEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142549 for 2060 contacts (-69.2/contact) +
2D Compatibility (PS) -25207 + (NN) -11674 + (LL) 3748
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -189082.0 ( -91.79 by residue)
QMean score : 0.506
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