Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAMIGSGGFIAPKHLQAIRD--TGHFLDCSFDVHDSV-GVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKY-QKRVFSLLPLRLHCDTLALKEKIKSELDKNPEKVFDITLTYISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLLYLFGG-VKDKVINR-----------EEPDCVCGILFLEHAKI-RWFFSINPEHMG---VAKEKVYHKMILE--------------GEE--------VNLTQSFDNLYIESYKQILAQGGF--GLDDAAASIKLAYELRNLSLSEPNDDSHALCCKNKTDQ |
| 3CEA Chain:A ((9-343)) | LRAAIIGLG-RLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMID--------TENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI---GKIIYMRGYGIDPISGMESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPDLNRVTVFNDQGVVRPSLQSFGERFDTAFTDEVQDFVNNVIVGKQPEVTVDDGIKALKIAKACQQSANIGKLVDIQL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161484 for 2396 contacts (-67.4/contact) +
2D Compatibility (PS) -31235 + (NN) -5410 + (LL) 1000
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -204329.0 ( -85.28 by residue)
QMean score : 0.465
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