Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIVILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASSAQLIGLIFWAFIWGRYLLTLYFN
3ZE3 Chain:A ((15-130))
-----------GFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG-
General information:
TITO was launched using:
RESULT:
Template:
3ZE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60922 for 656 contacts (-92.9/contact) +
2D Compatibility (PS) -12464 + (NN) -8295 + (LL) 404
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -94877.0 ( -144.63 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3ZE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZE3-query.scw
PDB file :
Tito_Scwrl_3ZE3.pdb
: