Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQY-ANAYQAYQHNRVSVESPAKLIE--MLYEGILRFSSQ-AKRCIENEDIEKKIYYINR-VTDIFTELLN-ILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
3MGL Chain:A ((2-129))
NAEMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFERVMGSIQETPQILILRLKWVPFMDITGIQTLEEMIQSFHKRG-IKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQ---
General information:
TITO was launched using:
RESULT:
Template:
3MGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36047 for 845 contacts (-42.7/contact) +
2D Compatibility (PS) -12748 + (NN) 112 + (LL) 488
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -51345.0 ( -60.76 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3MGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MGL-query.scw
PDB file :
Tito_Scwrl_3MGL.pdb
: