Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNIQAFRPKQ
2IS8 Chain:A ((1-156))
--MFRVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEV--AAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGVAGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTGKPWK-------------
General information:
TITO was launched using:
RESULT:
Template:
2IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115396 for 1332 contacts (-86.6/contact) +
2D Compatibility (PS) -16414 + (NN) -2631 + (LL) 1928
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -143913.0 ( -108.04 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_2IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IS8-query.scw
PDB file :
Tito_Scwrl_2IS8.pdb
: