Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNP----KHTIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFENNYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS---------------------
1UAL Chain:A ((19-270))
SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLSFADGL---------LDCPHYT----RPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNSLEHH
General information:
TITO was launched using:
RESULT:
Template:
1UAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121933 for 1559 contacts (-78.2/contact) +
2D Compatibility (PS) -23620 + (NN) -11445 + (LL) 656
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -176292.0 ( -113.08 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1UAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAL-query.scw
PDB file :
Tito_Scwrl_1UAL.pdb
: