Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLEDYAISLEEVNFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPYYL-EGNVYDFEKYGFRMVYDDTSLSDKKN------------------------------------------- |
| 1YT8 Chain:A ((6-530)) | IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVPSKAFGELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISVPGAELVLRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERLG--TAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESLLASPRIDRYRRPYEGTDNPREAMQGYLDWEFGLVEQLGRDGTHGFFVIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41406 for 855 contacts (-48.4/contact) +
2D Compatibility (PS) -12536 + (NN) -7877 + (LL) 164
1D Compatibility (HY) 0 + (ID) 900
Total energy: -62555.0 ( -73.16 by residue)
QMean score : 0.506
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