Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVVACSVIGAALAIGLATLGAAIGQGIAVSRATEIIGKNPNAKKEVMGGLFLGLLMIVALMLFALAIAVILLWVNPFI
3ZK2 Chain:K ((9-85))
--IVLGCSAVGAGLAM-IAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYANPFL
General information:
TITO was launched using:
RESULT:
Template:
3ZK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54938 for 447 contacts (-122.9/contact) +
2D Compatibility (PS) -8171 + (NN) -6517 + (LL) -40
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -78716.0 ( -176.10 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK2-query.scw
PDB file :
Tito_Scwrl_3ZK2.pdb
: