Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLERCGTGRVVLVHDGARPFITLDIIDRLLIGVEQSKA-AICAVKVKDTVKRVMNG--VVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
1I52 Chain:A ((5-229))
HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHP----QITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
General information:
TITO was launched using:
RESULT:
Template:
1I52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150562 for 1806 contacts (-83.4/contact) +
2D Compatibility (PS) -24011 + (NN) -5512 + (LL) 508
1D Compatibility (HY) -10800 + (ID) 4000
Total energy: -194377.0 ( -107.63 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1I52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I52-query.scw
PDB file :
Tito_Scwrl_1I52.pdb
: