Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGI---GMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYK--------LKKKGDDEYQYDGTLISKKVY--SYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFV--FSLEMQSGKLIFKKVDTKEKVLIKETYKKN----------------------------------- |
4E1S Chain:A ((1-242)) | QHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKMLAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSG------DNTRLGIGGEYWRDYFKSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYG-----DNVALFNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIEPQYVNELRTLSGSRYDLVQRNNNIILEYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 49687 for 1097 contacts (45.3/contact) +
2D Compatibility (PS) -17629 + (NN) 12467 + (LL) 912
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: 40287.0 ( 36.72 by residue)
QMean score : 0.122
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