Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLEH---K----E-R----LGYN-IP--------KKDTEYIGFAALSEVGEMVGGVTAKISY--------GELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTT--FSYQAPEFYRKCGFTELGRVKDFPIKG-EEKYFFIKYL
1TIQ Chain:A ((2-170))
-SVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMS-SQFFFI-YFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQTDLIMAKT-
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46973 for 905 contacts (-51.9/contact) +
2D Compatibility (PS) -14584 + (NN) -1122 + (LL) 664
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -66865.0 ( -73.88 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: