Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIP--LGLEGKDLIGQAQTGTGKTAAFGLPMI-HKIDQKSNN---VQALIIAPTRELAIQVSEELYKLSYD-----KHVRVLAVYGGSDISRQIRSLKK-NPQIVVGTPGRILDHINRRTLKL-DHVETLVLDEADEMLNMGFIDDIETI---LKEVPAER----QTLLFSATMPDPIRRIGERFMHSPELIRIKAKE-----------MTALLIEQF----FVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALD---MRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGRRSGGGSGGGSGSGGGGNRDRRGGGEQRSGGNKGNYSQKSK |
3I5X Chain:A ((79-459)) | --------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKI-HDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKK-----QIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELED------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159697 for 2775 contacts (-57.5/contact) +
2D Compatibility (PS) -37044 + (NN) -13152 + (LL) 3012
1D Compatibility (HY) -30800 + (ID) 6600
Total energy: -244281.0 ( -88.03 by residue)
QMean score : 0.522
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