Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNLKSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE
1KKL Chain:H ((15-100))
--QKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKSIMGVMSLGIAKGAEITISASGADENDALNALEETMKSERLGE
General information:
TITO was launched using:
RESULT:
Template:
1KKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61489 for 651 contacts (-94.5/contact) +
2D Compatibility (PS) -9434 + (NN) -5037 + (LL) 312
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -86348.0 ( -132.64 by residue)
QMean score : 0.700
(partial model without unconserved sides chains):
PDB file :
Tito_1KKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KKL-query.scw
PDB file :
Tito_Scwrl_1KKL.pdb
: