Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGT---HAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGAD----IIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGVVADPTWDAPRTDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 1IJI Chain:A ((3-356)) | TVTITDLARENVRNLTPYQSARRL--GGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQPKAVIENYAQYAGVK----PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG----------VECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSP----NNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRC-GFTLANEEVINLLMKVIAPYPLSTPVADIAAQALS-PQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVF---DSETNYILARFKASSAVFKSLWD-------QGIILRDQNKQPSLSGCLRITVGT----------------------------REESQRVIDALRAEQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131736 for 2851 contacts (-46.2/contact) +
2D Compatibility (PS) -37535 + (NN) -20675 + (LL) 3980
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -198616.0 ( -69.67 by residue)
QMean score : 0.348
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