Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYG-TAPD-VVHLVETKADIDALSLLS-DKIFVTNQTTMSKWDVADLMHYIKGKFPKAI--QHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWK-REHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
3T0F Chain:B ((13-318)) | MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFI-----EQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAG------TMGQ----GGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELA-QRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFE--VPK---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3T0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175325 for 2423 contacts (-72.4/contact) +
2D Compatibility (PS) -31329 + (NN) -10344 + (LL) 1460
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -238138.0 ( -98.28 by residue)
QMean score : 0.581
|
|
|