Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIF----QELGMNAEYNSVLIEEDAFETEIK-KLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGL--EASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 3PHI Chain:B ((3-247)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILL---PLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-------YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD----CFMEPPK--SAFDLIINATSASLHNELPLNKEVLK-GYFKEGKLAYDLAYG-FLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69139 for 2062 contacts (-33.5/contact) +
2D Compatibility (PS) -24739 + (NN) -4345 + (LL) 3036
1D Compatibility (HY) -19600 + (ID) 4100
Total energy: -118887.0 ( -57.66 by residue)
QMean score : 0.434
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