Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNDIIHDYLLKNIP--KSSPFFKELEAYAKEN--EVPIMEPDSLYCLLQILDIQKPKRILELGTAIGYSALKMADKLP-DAEIITVERDEERYEQAIHNIQRYGASDRVKVLLTDAIEGAEEIL----AHGPFDAIFIDAAKAQYEKFFHIYTVSLAENGVIYSDNVLFKGLALDMTPE-KQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS |
| 3C3Y Chain:A ((17-236)) | -SEELCQYILRTSVYPREAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITFCRRL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96497 for 1737 contacts (-55.6/contact) +
2D Compatibility (PS) -22475 + (NN) -9726 + (LL) 128
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -140370.0 ( -80.81 by residue)
QMean score : 0.582
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