Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDVNNVELIISAVRPEQYPETDLPE---YALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE---EALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEFLKYYDIPVIVIATKADKIPRSKWQKNAKIVRETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME------------------------------------------------------------------------------ |
| 1XZP Chain:A ((27-482)) | SSVDKLMDTIVAVATPPGKGAIAILRLSGPDSWKIVQKHLRTRSKIVPRKAIHGWIHENGEDVDEVVVVFYKSPKSYTGEDMVEVMCHGGPLVVKKLLDLFLKSGARMAEPGEFTKRAFLNGKMDLTSAEAVRDLIEAKSETSLKLSLRNLKGGLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDR-AIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLG----IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIK--NKRYLVVINKVDVVEKINEEEIKNKL------GTDRHMVKISALKGEGLEKLEESIYRETQEIFERGSDSLITNLRQKQLLENVKGHLEDAIKSLKEGMPVDMASIDLERALNLLDEVTGRSFREDLLDTIFSNFCVGK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65451 for 1238 contacts (-52.9/contact) +
2D Compatibility (PS) -19538 + (NN) -5700 + (LL) 1264
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -96425.0 ( -77.89 by residue)
QMean score : 0.452
|
|
|