Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKFLLFDL-TNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
1PM5 Chain:A ((1-270))-PELPEVETVRRELEKRIVGQKIISIEATYPRMVL-TGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFAD-GQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTY-SALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQ


General information:
TITO was launched using:
RESULT:

Template: 1PM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88519 for 2211 contacts (-40.0/contact) +
2D Compatibility (PS) -28416 + (NN) -5716 + (LL) 416
1D Compatibility (HY) -22000 + (ID) 5700
Total energy: -149935.0 ( -67.81 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_1PM5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PM5-query.scw
PDB file : Tito_Scwrl_1PM5.pdb: