Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPR-LGNPTPRVAETA----------SGMLNAIGLQNPGLEHVLAHELPFLE-QFETPIIANVAGA-TEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGM-RIDLKTRKPII------ANGTGGLSGPAIKPVAIRMIHQVRAVS-NIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFT-DPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 1GTE Chain:A ((531-855)) | -VDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEAS-GADALELNLSCPHGMG--LACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203222 for 2597 contacts (-78.3/contact) +
2D Compatibility (PS) -31117 + (NN) -8679 + (LL) 452
1D Compatibility (HY) -14000 + (ID) 3950
Total energy: -260516.0 ( -100.31 by residue)
QMean score : 0.458
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