Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKD-PSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
1WUR Chain:B ((32-216))
--EVDLERLQALAAEWLQVIGEDPGREGLLKTPERVAKAWAFLTRGYRQRLEEVVGGAVFPAEGSEMVVVKGVEFYSMCEHHLLPFFGKVHIGYIP-DGKILGLSKFARIVDMFARRLQVQERLAVQIAEAIQEVLEPQGVGVVVEGVHLCMMMRGVEKQHSRTVTSAMLGVFRENQKTREEFLSHLR--
General information:
TITO was launched using:
RESULT:
Template:
1WUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106074 for 1383 contacts (-76.7/contact) +
2D Compatibility (PS) -20095 + (NN) -7332 + (LL) 396
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -153755.0 ( -111.17 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1WUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WUR-query.scw
PDB file :
Tito_Scwrl_1WUR.pdb
: