Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIYFDHAATTKMSEAALEVFMSASREFFANSESLHDAGTKSAALLEKCRGSFAEILHVPSRGIMFTSGGTESNQIAIQTLLHST--KKKEVLVSPLEHASVWQQLEALEEAGACWLRLLPVDAFGRVDPAVLSDMISPDTGLVIIQHVNSEIGSIQPIRELAHIAKQAG--VYFHTDIVQSFGKLDLTLDD--VTSFSISSHKIYGPKGAGLLFIKPDVPMQVPLPNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAKVKVEGGLNTS--PFILGITLPNMQGQEALLALNEADIQISTTSACSLRDPAPSRTLLATGKTIEEASRFIRLSFGRENELSDSLIFKKELDKLLRKR |
| 1ECX Chain:A ((1-376)) | MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGF-KVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVS------------THVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185736 for 3078 contacts (-60.3/contact) +
2D Compatibility (PS) -39640 + (NN) -25215 + (LL) 368
1D Compatibility (HY) -18400 + (ID) 5300
Total energy: -273923.0 ( -88.99 by residue)
QMean score : 0.560
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