Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYGGMGSYHVTLASAA-DNLEVHGVFDILEEKREAA-AEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANG----IPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL-GDEVDDGFVTFITFENGITAQIEVGTTNFI--KLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3Q2I Chain:A ((11-350)) | DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIG-PVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNVTMLTYPKNLEGSITILGEKGSVRVGGVAVNE-IQHWEFS-EPH---------AMDEEIKDA---S---------GFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211363 for 2800 contacts (-75.5/contact) +
2D Compatibility (PS) -35156 + (NN) -13473 + (LL) 1052
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -273840.0 ( -97.80 by residue)
QMean score : 0.569
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