Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLEIQGLKKKYNG----KWVIKGIDLTINEKECVALIGPNGAGKSTMINMIVQILTQDEGQITLDGE--------SAKLVREKIGFLPQYPEFYGWMSATECLHFMGKLSNMEKTDLKARINEVLLLVGLEESANKKISTYSGGMRQRLGIAQAILHRPELLVLDEPVSALDPIGRREMMLLLDKLKKE--ITILFSTHILKDAEEICDRIAIIKNGELVADKTVVQLMEEESSPVFDVEF--------------------NGNSEAWQTLLLQNKYVEKIEKVGMVYQ-------VYTTNQKAGSEAVLSSLLQIDGEFIRVENRHQSLEEIFMEKVGK |
3TUZ Chain:H ((23-362)) | -HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150775 for 2321 contacts (-65.0/contact) +
2D Compatibility (PS) -31665 + (NN) -3253 + (LL) 272
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -203571.0 ( -87.71 by residue)
QMean score : 0.424
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