Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTETAEKVEYIIETKDVDLFYGSKQA--LQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHD-----------RLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG |
2ONJ Chain:B ((340-555)) | ------------IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDV-----TSGQILIDGHNIKDFLTG--SLRNQIGLVQQDNILFSDTVKENILLG------RPTATDEEVVE-----AAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITH-ADKIVVIENGHIVE------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ONJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95198 for 1588 contacts (-59.9/contact) +
2D Compatibility (PS) -21997 + (NN) -9262 + (LL) 4024
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -139283.0 ( -87.71 by residue)
QMean score : 0.487
|
|
|