Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDGLIKI-GH-FVLSEKNIWEIRRQVGMVFQNPDNQFVGATVQDDVAFGLENHGVPHDTMVERVESA-----LNEV--GMQSYALHEPARLSGGQKQRVAIAGVLALQPDVIILDEATSMLDPRGRAEVMETI-RIMREQEDITVISITHDLDEVLFADRVIVMNKGEIHSEGTPKEIFQQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLNSNN |
| 2FFA Chain:A ((8-237)) | -----ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN-W-LRRQVGVVLQ--DNVLLNRSIIDNIS--LANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR---TVIIIAARLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESL--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130402 for 1676 contacts (-77.8/contact) +
2D Compatibility (PS) -22870 + (NN) 1075 + (LL) 3648
1D Compatibility (HY) -23200 + (ID) 4000
Total energy: -175749.0 ( -104.86 by residue)
QMean score : 0.485
|
|
|