Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKLKKVAMGITVVMASSLLLVGCG-------SSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFM---SIEVKDGKITKANYDYKNKDGKLKSEDADYEKAMKDKVGTGPQEYLKQLSDSLVKN------QSAASVEVVSGATHSSDAFINYANQLIQAAQKAD-TTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE- |
| 3WO4 Chain:B ((1-301)) | GPESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNVIRRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTL-VNSTSLYKNCKKLLLENNKNPTIKKNAEFEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVA-------VELGKNVRLNCSALLNE----EDVIYWMFGEENGSDPNIHEEKEMRIMTPEGKWHASKVLRIENI-GESNLNVLYNCTVAS---TGGTDT-KSFILVRKAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 110665 for 1850 contacts (59.8/contact) +
2D Compatibility (PS) -28700 + (NN) 8583 + (LL) 1580
1D Compatibility (HY) -4400 + (ID) 2400
Total energy: 85328.0 ( 46.12 by residue)
QMean score : 0.040
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