Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTENEQLFWNRVLELSRSQIAPAAYEFFVLEARLLKIEHQTAVITLDNIEMKKLFWEQNLGPVILTAGFEIFNAEITANYVSNDLHLQETSFSNYQQSSNEVNTLPIRKIDSNLKEKYTFANFVQGDENRWAVSASIAVADSPGTTYNPLFIWGGPGLGKTHLLNAIGNQVLRDNPNARVLYITAENFINEFVSHIRLDSMEELKEKF--RNLDLLLIDDIQSLAKKTLG----GTQEEFFNTFNALHT-NDKQIVLTSDRNPNQLNDLEERLVTRFSWGLPVNITPPDFETRVAILTNKIQEYPYDFPQDTIEYLAGEFDS-NVRELEGALKNISLVADFKHAKTITVDIAAEAIRARKNDGPIVTVIPIEEIQIQVGKFYGVTVKEIKATKRTQDIVLARQVAMYLAREMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMVAQDDNLRIEIETIKNKIR |
| 3EIE Chain:A ((50-238)) | -------------------------------------------------------------------------------------------------------------------------------------------------PTSGILLYGPPGTGKSYLAKAVATEA-----NSTFFSVSSSDLVSKWMGESEK-LVKQLFAMARENKPSIIFIDQVDALTGT---EASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQ---LDSAIRRRFER--RIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90835 for 1271 contacts (-71.5/contact) +
2D Compatibility (PS) -18947 + (NN) -10121 + (LL) 15112
1D Compatibility (HY) -10000 + (ID) 1450
Total energy: -116241.0 ( -91.46 by residue)
QMean score : 0.605
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