Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIKVYKPTTNGRRNMTSLDFAEITTNTPEKSLLVSLKNKAGRNNNGRITVRHQGGGHKRHYRLIDFKR---NKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYILAPKGLEVGQR-II-SGPEADIKVGNALPLANIPVGTVIHNIELQPGKGAELIRAAGASAQVLGQEGKYVLVRLQSGEVRM-ILGTCRATIGTVGNEQQSLVNIGKAGRNRWKGVRPTVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQK |
| 1RL2 Chain:A ((60-195)) | ------------------------------------------------------------QYRIIDFKRDKD---GIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVG--MEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEV-RMILGKCRATVGEVG--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59018 for 950 contacts (-62.1/contact) +
2D Compatibility (PS) -13322 + (NN) -1968 + (LL) 4800
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -76358.0 ( -80.38 by residue)
QMean score : 0.215
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