Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAI---GLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITIVSNKSRSNMRAQIDIPLFVHTNLDQISDIVTKINEEYVSKHPAIVGEPTVFGPTTNANGQFVYRINIFTQNGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
| 4WW7 Chain:A ((4-257)) | ------------------EFIDKVSSYLTPDVDIAPISQGAAIVFTTTTHPYL--PRAKDSHQKYIIKYRPRTLNESRLLAKLYLIPGLCVPQLIACDPYNGFIWLEFLGEDLPGGHGFSNLKNFLWMHDQDPYS-------DLVATTLRKVGRQIGLLHWNDYCHGDLTSSNIVLVRDGA-------RWTPHLIDFGLGSVSNLVEDKGVDLYVLERAILSTHSKHAEKYNAWIMEGFEEVYREQGAKGAKKLKEVTKRFEEVRLR------------GRKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106728 for 1738 contacts (-61.4/contact) +
2D Compatibility (PS) -23731 + (NN) 5552 + (LL) 3596
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -130661.0 ( -75.18 by residue)
QMean score : 0.187
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